libpappsomspp
Library for mass spectrometry
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pappso::ProteinIntegerCode Member List

This is the complete list of members for pappso::ProteinIntegerCode, including all inherited members.

computePeptideCodeFragments(const AaStringCodec &codec, std::size_t fragment_size) constpappso::ProteinIntegerCodeprivate
convolution(const std::vector< uint32_t > &code_list_from_spectrum) constpappso::ProteinIntegerCode
convolutionKernel(const std::vector< uint32_t > &spectrum_code_list, std::vector< std::uint8_t >::const_iterator it_aa, std::vector< std::uint32_t >::const_iterator it_couple, std::vector< std::uint32_t >::const_iterator it_trio, std::vector< std::uint32_t >::const_iterator it_quatro, std::vector< std::uint32_t >::const_iterator it_cinqo) constpappso::ProteinIntegerCodeprivate
getPeptideCodedFragment(std::size_t size) constpappso::ProteinIntegerCode
getProteinSp() constpappso::ProteinIntegerCode
getSeqAaCode() constpappso::ProteinIntegerCode
m_peptideCodedFragmentspappso::ProteinIntegerCodeprivate
m_seqAaCodepappso::ProteinIntegerCodeprivate
match(const std::vector< uint32_t > &code_list) constpappso::ProteinIntegerCode
msp_proteinpappso::ProteinIntegerCodeprivate
ProteinIntegerCode(ProteinSp protein, const AaStringCodec &codec, std::size_t aa_str_max_size=5)pappso::ProteinIntegerCode
ProteinIntegerCode(const ProteinIntegerCode &other)pappso::ProteinIntegerCode
~ProteinIntegerCode()pappso::ProteinIntegerCodevirtual