libpappsomspp
Library for mass spectrometry
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xicpeptidefragmention.h
Go to the documentation of this file.
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/*******************************************************************************
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* Copyright (c) 2015 Olivier Langella <Olivier.Langella@moulon.inra.fr>.
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*
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* This file is part of the PAPPSOms++ library.
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*
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* PAPPSOms++ is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation, either version 3 of the License, or
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* (at your option) any later version.
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*
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* PAPPSOms++ is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
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*
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* Contributors:
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* Olivier Langella <Olivier.Langella@moulon.inra.fr> - initial API and
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*implementation
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******************************************************************************/
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#pragma once
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#include "
xicpeptideinterface.h
"
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namespace
pappso
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{
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class
XicPeptideFragmentIon
:
public
XicPeptideInterface
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{
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private
:
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const
PeptideFragmentIonSp
msp_peptideFragmentIon
;
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public
:
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XicPeptideFragmentIon
(
const
MsRunId
&msrun_id,
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const
PeptideFragmentIonSp
&peptideFragmentIonSp,
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unsigned
int
z
,
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PrecisionPtr
precision);
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XicPeptideFragmentIon
(
const
XicPeptideFragmentIon
&other);
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~XicPeptideFragmentIon
();
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const
PeptideFragmentIonSp
&
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getPeptideFragmentIonSp
()
const
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{
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return
msp_peptideFragmentIon
;
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};
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};
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}
// namespace pappso
pappso::MsRunId
MS run identity MsRunId identifies an MS run with a unique ID (XmlId) and contains eventually informa...
Definition
msrunid.h:54
pappso::PrecisionBase
Definition
precision.h:44
pappso::XicPeptideFragmentIon
Definition
xicpeptidefragmention.h:33
pappso::XicPeptideFragmentIon::msp_peptideFragmentIon
const PeptideFragmentIonSp msp_peptideFragmentIon
Definition
xicpeptidefragmention.h:35
pappso::XicPeptideFragmentIon::getPeptideFragmentIonSp
const PeptideFragmentIonSp & getPeptideFragmentIonSp() const
Definition
xicpeptidefragmention.h:46
pappso::XicPeptideFragmentIon::~XicPeptideFragmentIon
~XicPeptideFragmentIon()
Definition
xicpeptidefragmention.cpp:39
pappso::XicPeptideInterface
Definition
xicpeptideinterface.h:35
pappso
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition
aa.cpp:39
pappso::PeptideFragmentIonSp
std::shared_ptr< const PeptideFragmentIon > PeptideFragmentIonSp
Definition
peptidefragmention.h:46
pappso::PeptideIonCter::z
@ z
xicpeptideinterface.h
pappsomspp
xic
xicpeptidefragmention.h
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